[heuermh]

PR checklist

Closes #XXX

• This comment contains a description of changes (with reason).
• If you've fixed a bug or added code that should be tested, add tests!
• If you've added a new tool - have you followed the module conventions in the contribution docs
• If necessary, include test data in your PR.
• Remove all TODO statements.
• Broadcast software version numbers to topic: versions - See version_topics
• Follow the naming conventions.
• Follow the parameters requirements.
• Follow the input/output options guidelines.
• Add a resource label
• Use BioConda and BioContainers if possible to fulfil software requirements.
• Ensure that the test works with either Docker / Singularity. Conda CI tests can be quite flaky:
  • For modules:
    • nf-core modules test <MODULE> --profile docker
    • nf-core modules test <MODULE> --profile singularity
    • nf-core modules test <MODULE> --profile conda
  • For subworkflows:
    • nf-core subworkflows test <SUBWORKFLOW> --profile docker
    • nf-core subworkflows test <SUBWORKFLOW> --profile singularity
    • nf-core subworkflows test <SUBWORKFLOW> --profile conda

---

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[github-actions]

This PR exceeds the recommended size of 1000 lines. Please make sure you are NOT addressing multiple issues with one PR. Note this PR might be rejected due to its size.

[mashehu]

why are you removing the cond-lock files?

[heuermh]

All I did was run nf-core modules bump bwameth and then test with nf-test and update snapshots. I'm not even sure what cond-lock files are for, it's hard to keep up 😅

[mashehu]

are you using the latest version of tools (4.2.1)? the conda lock files will allow us to finally have reproducible conda builds

[heuermh]

Nope, I was on 4.2.0, sorry

[heuermh]

@mashehu Thank you for your help! Is there anything left to do here? If I put the state of the conda files in peril, I can start again from scratch with tools version 4.2.1 and create a new pull request